AMTR_s00012p00243090 (WRKY49, ATWRKY49,...)

Aliases : WRKY49, ATWRKY49, evm_27.TU.AmTr_v1.0_scaffold00012.223

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00012p00243090

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00103880	WRKY55,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00156p00038330	WRKY9, ATWRKY9,...	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.05	OrthoFinder output from all 47 species
AT2G37260	WRKY44, TTG2,...	WRKY family transcription factor family protein	0.05	OrthoFinder output from all 47 species
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.05	OrthoFinder output from all 47 species
Ala_g33360	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19011	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20678	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22969	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g58933	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g63222	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g16136	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06724.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18893.t1	ATWRKY57,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene29537.t1	AtWRKY20,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30007.t1	ATWRKY45,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52797.t2	Aspi01Gene52797	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52797.t3	Aspi01Gene52797	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52813.t2	Aspi01Gene52813	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64697.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65370.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65373.t1	WRKY26, Aspi01Gene65373	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65392.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68480.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0206.g057856	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.02	OrthoFinder output from all 47 species
Cba_g30094	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68331	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G048500.1	Ceric.13G048500	not classified & original description: pacid=50636587...	0.04	OrthoFinder output from all 47 species
Ceric.13G048600.1	Ceric.13G048600	WRKY-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.17G009500.1	ATWRKY57,...	WRKY-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.31G073200.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.31G073300.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g11682	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g23577	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g09707	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01026969001	ATWRKY24, WRKY24	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01033063001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01033195001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01034968001	WRKY48, ATWRKY48	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01037686001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Gb_01873	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_17074	WRKY49, ATWRKY49	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Gb_41027	WRKY26	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g40430.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os01g60540.1	WRKY62,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g40080.1	WRKY54,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os05g49100.1	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os06g06360.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os07g48260.1	WRKY54,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os11g02480.2	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g02420.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_10428091g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_125146g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_175750g0010	WRKY9, ATWRKY9	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_186293g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_4321850g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_7831917g0010	AtWRKY47, WRKY47	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_83250g0010	WRKY6, ATWRKY6	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_934202g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Pir_g36197	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g18731	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19196	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26988	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c7_18860V3.1	WRKY6, ATWRKY6,...	WRKY family transcription factor	0.01	OrthoFinder output from all 47 species
Ppi_g16650	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22236	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019809	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1077	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022734	ATWRKY45, WRKY45	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g089960.3.1	Solyc01g089960	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g056365.1.1	Solyc04g056365	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc05g015850.4.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc10g005680.2.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc10g084380.1.1	WRKY4, Solyc10g084380	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Tin_g44569	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e010048_P001	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e020410_P001	WRKY28,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e029092_P002	ATWRKY24,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e032189_P001	WRKY56,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e038239_P001	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	111	167

External Links

No external refs found!

AMTR_s00012p00243090 (WRKY49, ATWRKY49,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation