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Description : Chromatin organisation.histones.H3-type histone
Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00009p00250010 | |
| Cluster | HCCA: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00027p00248560 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11657 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14635.t1 | Aspi01Gene14635 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58554.t1 | Aspi01Gene58554 | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0079.g038413 | No alias | histone *(H3) & original description: CDS=1-621 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G051800.1 | Ceric.14G051800 | not classified & original description: pacid=50634871... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01832 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g20346 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31882 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31892 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g26211 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29904 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_113838g0010 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| MA_74555g0010 | No alias | Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41988 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55056 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22036 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04339 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g22408 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g43939 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008160_P001 | Zm00001e008160 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019170_P001 | Zm00001e019170 | histone (H3) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 60 | 132 |
| No external refs found! |