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  5. AMTR_s00008p00120470

AMTR_s00008p00120470 (TEL1,...)


Aliases : TEL1, evm_27.TU.AmTr_v1.0_scaffold00008.53

Description : Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00120470
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.06 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.05 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.04 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.04 OrthoFinder output from all 47 species
GSVIVT01008932001 MCT1 Protein terminal ear1 homolog OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36140.1 TEL1, LOC_Os09g36140 Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g13724 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006958 TEL1 not classified & original description: CDS=1-1983 0.04 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.03 OrthoFinder output from all 47 species
Zm00001e025198_P001 TEL1, Zm00001e025198 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 169 277
No external refs found!