AMTR_s00007p00219480 (HEME2,...)


Aliases : HEME2, evm_27.TU.AmTr_v1.0_scaffold00007.207

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase


Gene families : OG0002087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00219480

Target Alias Description ECC score Gene Family Method Actions
AT2G40490 HEME2 Uroporphyrinogen decarboxylase 0.06 OrthoFinder output from all 47 species
AT3G14930 HEME1 Uroporphyrinogen decarboxylase 0.03 OrthoFinder output from all 47 species
Adi_g022638 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g04033 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13341 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12256 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01270 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07294 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61203 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68757.t1 HEME2, Aspi01Gene68757 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030928 HEME1 EC_4.1 carbon-carbon lyase & original description: CDS=53-1354 0.03 OrthoFinder output from all 47 species
Ceric.16G044600.1 HEME2, Ceric.16G044600 EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
Cre02.g073700 HEME2 Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder output from all 47 species
Cre02.g076300 HEME1 Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Cre11.g467700 HEME2 Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder output from all 47 species
Dac_g08545 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01104 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15483 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09522 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01091 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02496 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032710001 HEME2 Coenzyme metabolism.tetrapyrrol... 0.07 OrthoFinder output from all 47 species
Gb_19378 HEME2 uroporphyrinogen III decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os03g21900.1 HEME2, LOC_Os03g21900 uroporphyrinogen III decarboxylase 0.04 OrthoFinder output from all 47 species
Len_g09571 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17519 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02794 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02865 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435805g0010 HEME1 uroporphyrinogen III decarboxylase 0.03 OrthoFinder output from all 47 species
MA_10435949g0010 HEME2 uroporphyrinogen III decarboxylase 0.04 OrthoFinder output from all 47 species
Mp1g00080.1 HEME2 uroporphyrinogen III decarboxylase 0.05 OrthoFinder output from all 47 species
Mp2g07210.1 HEME2 uroporphyrinogen III decarboxylase 0.03 OrthoFinder output from all 47 species
Msp_g10077 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04176 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00935 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11672 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02424 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06307 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014871 HEME1 EC_4.1 carbon-carbon lyase & original description: CDS=111-1343 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017290 HEME2 EC_4.1 carbon-carbon lyase & original description: CDS=109-1317 0.05 OrthoFinder output from all 47 species
Sam_g06891 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15628 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo438672 HEME2 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder output from all 47 species
Solyc06g048730.3.1 HEME2, Solyc06g048730 uroporphyrinogen III decarboxylase 0.05 OrthoFinder output from all 47 species
Solyc10g007320.3.1 HEME1, Solyc10g007320 uroporphyrinogen III decarboxylase 0.04 OrthoFinder output from all 47 species
Spa_g06611 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09313 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00829 HEME2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01749 HEME1 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000257 Uroporphyrinogen_deCOase 52 386
No external refs found!