1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00145260

AMTR_s00007p00145260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.102

Description : Endoglucanase 15 OS=Arabidopsis thaliana


Gene families : OG0009895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00145260

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene43496.t1 GH9B18,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436665g0010 AtGH9B13, GH9B13 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g38066 AtGH9C1, GH9C1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g45088 AtGH9C1, GH9C1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 1 91
No external refs found!