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  5. AMTR_s00004p00247810

AMTR_s00004p00247810 (ICL,...)


Aliases : ICL, evm_27.TU.AmTr_v1.0_scaffold00004.242

Description : Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal isocitrate lyase


Gene families : OG0002469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00247810

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00247630 ICL,... Lipid metabolism.lipid degradation.fatty acid... 0.05 OrthoFinder output from all 47 species
AT3G21720 ICL isocitrate lyase 0.03 OrthoFinder output from all 47 species
Adi_g025565 ICL EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11642.t1 ICL, Aspi01Gene11642 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010083 No alias not classified & original description: CDS=1-351 0.05 OrthoFinder output from all 47 species
Cba_g25587 ICL EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G062800.1 ICL, Ceric.27G062800 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G039400.1 ICL, Ceric.29G039400 EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01030608001 ICL Lipid metabolism.lipid degradation.fatty acid... 0.04 OrthoFinder output from all 47 species
Gb_04100 ICL isocitrate lyase 0.03 OrthoFinder output from all 47 species
LOC_Os07g34520.1 ICL, LOC_Os07g34520 isocitrate lyase 0.05 OrthoFinder output from all 47 species
MA_2406414g0010 ICL isocitrate lyase 0.03 OrthoFinder output from all 47 species
MA_3693801g0010 ICL isocitrate lyase 0.03 OrthoFinder output from all 47 species
MA_93292g0010 ICL isocitrate lyase 0.03 OrthoFinder output from all 47 species
Pir_g17140 ICL EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23552 ICL EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g24878 ICL EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g30559 ICL EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04233 ICL EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28268 ICL EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!