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  5. AMTR_s00003p00020850

AMTR_s00003p00020850 (MIRO1, emb2473,...)


Aliases : MIRO1, emb2473, evm_27.TU.AmTr_v1.0_scaffold00003.6

Description : Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana


Gene families : OG0002515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00020850

Target Alias Description ECC score Gene Family Method Actions
Als_g09045 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.03 OrthoFinder output from all 47 species
Cba_g17250 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
Cba_g26280 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
Ceric.32G015700.1 MIRO1, emb2473,... regulatory GTPase (MIRO) of mitochondrion fission &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.8 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g06404 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000044001 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g59590.1 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g07355 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.03 OrthoFinder output from all 47 species
MA_97016g0010 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g22030.1 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo173355 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g12756 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.03 OrthoFinder output from all 47 species
Zm00001e011800_P001 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013566 EF_hand_assoc_1 352 421
IPR013567 EF_hand_assoc_2 229 317
No external refs found!