Sequence Description Alias PCC hrr AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase IBR3, evm_27.TU.AmTr_v1.0_scaffold00003.89 0.955593835239222 2 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9467281448293097 2 AMTR_s00114p00022520 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00114.8 0.9426594007318522 3 AMTR_s00066p00096020 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) GDI2, ATGDI2, evm_27.TU.AmTr_v1.0_scaffold00066.78 0.9392434133959473 4 AMTR_s00010p00207960 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.201 0.9386802372499663 5 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component DGL1, evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9378122879876403 9 AMTR_s00046p00225460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.SymRK/DMI2 receptor kinase evm_27.TU.AmTr_v1.0_scaffold00046.162 0.9375106181972733 7 AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.936357207183024 8 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1, evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9362808102426441 18 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9362392879781556 11 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2, evm_27.TU.AmTr_v1.0_scaffold00122.38 0.935644279009474 16 AMTR_s00069p00133460 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1, evm_27.TU.AmTr_v1.0_scaffold00069.97 0.9352411007617778 12 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2, evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9339992449407021 13 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.933533403642839 14 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9334313508037424 15 AMTR_s00001p00229100 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF64/Rna15 component CSTF64, evm_27.TU.AmTr_v1.0_scaffold00001.240 0.9333489170948327 16 AMTR_s00030p00083820 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1, evm_27.TU.AmTr_v1.0_scaffold00030.33 0.9325079608095851 22 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3, evm_27.TU.AmTr_v1.0_scaffold00076.20 0.9302523800642916 18 AMTR_s00016p00180540 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00016.142 0.9291561284852388 44 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana NSL1, evm_27.TU.AmTr_v1.0_scaffold00068.151 0.9290515683610323 20 AMTR_s00048p00222520 evm_27.TU.AmTr_v1.0_scaffold00048.207 0.9284013308977485 21 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor DEX1, evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9283385896549472 22 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14, evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9280804889114683 29 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.9278354529699329 24 AMTR_s00177p00032620 Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.11 0.9270504269753796 25 AMTR_s00061p00131900 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component VCS, evm_27.TU.AmTr_v1.0_scaffold00061.110 0.926958675895565 26 AMTR_s02210p00008540 AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02210.1 0.9265273387208786 28 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9265139199821663 28 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9264402408326208 29 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme NAD-ME1, evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9257235156771102 30 AMTR_s00024p00115620 Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.65 0.9256580154008267 31 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA2, KEA2, evm_27.TU.AmTr_v1.0_scaffold00009.318 0.9253759822355335 32 AMTR_s00024p00216120 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP7 assembly factor evm_27.TU.AmTr_v1.0_scaffold00024.201 0.9248408333110814 33 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9244892030234888 63 AMTR_s00039p00218660 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA9 component evm_27.TU.AmTr_v1.0_scaffold00039.189 0.9239149484286762 35 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9233779896004988 36 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.9232269044774 37 AMTR_s00014p00249480 Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00014.129 0.921972099237748 38 AMTR_s00079p00125070 evm_27.TU.AmTr_v1.0_scaffold00079.50 0.9219094281802668 39 AMTR_s00109p00082150 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.MFP multifunctional enzyme AIM1, evm_27.TU.AmTr_v1.0_scaffold00109.66 0.9214764246431643 40 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor SPL1, evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9211072855083372 44 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP7, evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9209402995503863 42 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana SC35, ATSC35, At-SC35, evm_27.TU.AmTr_v1.0_scaffold00176.28 0.9208403164073736 43 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9202616533833692 44 AMTR_s00016p00254170 evm_27.TU.AmTr_v1.0_scaffold00016.320 0.9201006609815335 45 AMTR_s00004p00159650 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica RFC1, AtRFC1, evm_27.TU.AmTr_v1.0_scaffold00004.171 0.919515755292974 46 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.9193446587633682 47 AMTR_s00069p00056230 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase XBAT33, evm_27.TU.AmTr_v1.0_scaffold00069.34 0.9191984269900333 48 AMTR_s00045p00199380 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase evm_27.TU.AmTr_v1.0_scaffold00045.257 0.9188317311977869 49 AMTR_s00001p00245410 DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana RH1, ATRH1, evm_27.TU.AmTr_v1.0_scaffold00001.293 0.9187550316555647 50 AMTR_s00059p00105450 evm_27.TU.AmTr_v1.0_scaffold00059.80 0.9183613211267001 51 AMTR_s00011p00260650 Protein modification.O-linked glycosylation.hydroxyproline O-linked glycosylation.arabinosyltransferase (XEG113) XEG113, evm_27.TU.AmTr_v1.0_scaffold00011.193 0.9178022501362058 52 AMTR_s00036p00071330 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.25 0.9170730072648083 54 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.9168099527680792 55 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.9163785605582905 56 AMTR_s00028p00081930 evm_27.TU.AmTr_v1.0_scaffold00028.20 0.9163418767935539 57 AMTR_s00064p00050700 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00064.11 0.9161694269601576 58 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.9159537912980238 59 AMTR_s00061p00073040 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.48 0.9157517583363765 60 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component ATTAF6, TAF6, TAFII59, evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9153682086276143 75 AMTR_s00016p00139220 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit C ATVHA-C, DET3, evm_27.TU.AmTr_v1.0_scaffold00016.97 0.9147386563740212 62 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana SMU2, evm_27.TU.AmTr_v1.0_scaffold00007.316 0.9136708517302483 63 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.9134373622766941 64 AMTR_s00025p00127670 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase DAL1, evm_27.TU.AmTr_v1.0_scaffold00025.120 0.9130367972178741 65 AMTR_s00014p00253620 evm_27.TU.AmTr_v1.0_scaffold00014.137 0.9129000868816233 66 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9128186594777425 67 AMTR_s00041p00073060 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol dehydrogenase HDH, HISN8, ATHDH, evm_27.TU.AmTr_v1.0_scaffold00041.43 0.9127308356247888 68 AMTR_s00059p00168200 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00059.161 0.912649136804104 69 AMTR_s00176p00021290 Protein modification.peptide maturation.endomembrane system.gamma secretase complex.NCT component evm_27.TU.AmTr_v1.0_scaffold00176.4 0.9125314826370934 70 AMTR_s00025p00188170 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-59K snRNP component evm_27.TU.AmTr_v1.0_scaffold00025.229 0.9123560663948495 71 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.9122224795297386 72 AMTR_s00022p00154020 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00022.155 0.9120382215687106 73 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2, evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9119934506138216 74 AMTR_s00039p00209870 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKR1, CHR4, evm_27.TU.AmTr_v1.0_scaffold00039.178 0.9117641403420592 75 AMTR_s00002p00270710 Phytohormones.ethylene.synthesis.ETO-type regulator protein EOL1, evm_27.TU.AmTr_v1.0_scaffold00002.595 0.9106808221122338 77 AMTR_s00050p00189240 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase ALE2, evm_27.TU.AmTr_v1.0_scaffold00050.52 0.9105999122564793 78 AMTR_s00040p00179700 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP71, evm_27.TU.AmTr_v1.0_scaffold00040.171 0.9101683200190922 79 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9085959864859532 82 AMTR_s00049p00194600 evm_27.TU.AmTr_v1.0_scaffold00049.205 0.9083343730957537 83 AMTR_s00088p00077590 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP9, evm_27.TU.AmTr_v1.0_scaffold00088.47 0.9082848449325105 84 AMTR_s00065p00185540 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-II glucosidase II complex.subunit alpha RSW3, PSL5, evm_27.TU.AmTr_v1.0_scaffold00065.158 0.9080426323443425 85 AMTR_s00096p00019400 Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana 0.9079407476150887 86 AMTR_s00041p00161550 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein AtHsp90.7, HSP90.7, AtHsp90-7, SHD, evm_27.TU.AmTr_v1.0_scaffold00041.114 0.9074901451668546 87 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9071971523481596 89 AMTR_s00066p00089100 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA, evm_27.TU.AmTr_v1.0_scaffold00066.69 0.906958780065611 97 AMTR_s00076p00017680 Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylcrotonoyl-CoA carboxylase complex.beta subunit MCCB, evm_27.TU.AmTr_v1.0_scaffold00076.3 0.906741703890335 91 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9066833120630079 92 AMTR_s00019p00236090 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1, evm_27.TU.AmTr_v1.0_scaffold00019.329 0.9065725938667821 93 AMTR_s00001p00120790 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.monodehydroascorbate reductase (MDAR) MDAR6, evm_27.TU.AmTr_v1.0_scaffold00001.90 0.9065695553308599 94 AMTR_s00059p00138250 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG7 ATG8/12-activating E1 protein ATAPG7, APG7, ATG7, ATATG7, evm_27.TU.AmTr_v1.0_scaffold00059.120 0.9065367554616682 95 AMTR_s00101p00130320 Cytoskeleton.microfilament network.actin organisation.SCAB regulator protein evm_27.TU.AmTr_v1.0_scaffold00101.104 0.906370132358894 97 AMTR_s00046p00200010 evm_27.TU.AmTr_v1.0_scaffold00046.127 0.9062047691085285 99 AMTR_s00020p00225970 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI transamidase complex.PIG-S component evm_27.TU.AmTr_v1.0_scaffold00020.98 0.9060608950519011 100