AMTR_s00002p00220330 (UBP20,...)

Aliases : UBP20, evm_27.TU.AmTr_v1.0_scaffold00002.236

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00220330
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AT3G14400	UBP25	ubiquitin-specific protease 25	0.03	OrthoFinder output from all 47 species
Adi_g013898	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g27664	UBP25	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g32497	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0056.g034212	UBP23	deubiquitinase *(UBP23) & original description: CDS=342-2441	0.03	OrthoFinder output from all 47 species
Cba_g14993	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.15G035800.1	UBP19, Ceric.15G035800	deubiquitinase *(UBP15-21) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.35G006100.1	UBP23, Ceric.35G006100	not classified & original description: pacid=50581315...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000808.46	DRP3B	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Dcu_g32712	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30240	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os08g37350.1	UBP17, LOC_Os08g37350	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Lfl_g09709	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
MA_127745g0010	UBP23	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ppi_g05909	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003832_P001	UBP17, Zm00001e003832	deubiquitinase (UBP15-21)	0.08	OrthoFinder output from all 47 species
Zm00001e014332_P001	UBP15, Zm00001e014332	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0004221	obsolete ubiquitin thiolesterase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006505	GPI anchor metabolic process	IEP	HCCA
BP	GO:0006506	GPI anchor biosynthetic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009247	glycolipid biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	188	489

External Links

No external refs found!

AMTR_s00002p00220330 (UBP20,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation