LOC_Os08g44040.1


Description : no hits & (original description: none)


Gene families : OG_01_0000794 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000794_tree ,
OG_02_0000615 (LandPlants) Phylogenetic Tree(s): OG_02_0000615_tree ,
OG_03_0000503 (SeedPlants) Phylogenetic Tree(s): OG_03_0000503_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44040.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00196000 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.04 Archaeplastida
AT4G24430 No alias Rhamnogalacturonate lyase family protein 0.04 Archaeplastida
GSVIVT01006302001 No alias No description available 0.03 Archaeplastida
Gb_00786 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_00787 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g03790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g03160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c4_23770V3.1 No alias Rhamnogalacturonate lyase family protein 0.02 Archaeplastida
Solyc04g076650.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011290.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011300.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g011310.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013992_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
AT4G24430 No alias Rhamnogalacturonate lyase family protein 0.01 LandPlants
GSVIVT01006302001 No alias No description available 0.02 LandPlants
Gb_00786 No alias no hits & (original description: none) 0.01 LandPlants
Mp2g13590.1 No alias no hits & (original description: none) 0.01 LandPlants
AT4G24430 No alias Rhamnogalacturonate lyase family protein 0.01 SeedPlants
LOC_Os12g03790.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029413 RG-lyase_II 326 397
IPR029411 RG-lyase_III 412 600
IPR010325 Rhamnogal_lyase 1 125
No external refs found!