Aev_g02524

Description : large subunit beta of AP-4 vacuole cargo adaptor complex & original description: none

Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g02524

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00102p00095780	evm_27.TU.AmTr_v1...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
AMTR_s00109p00033810	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.03	OrthoFinder output from all 47 species
AT4G23460	No alias	Adaptin family protein	0.05	OrthoFinder output from all 47 species
AT5G11490	No alias	adaptin family protein	0.03	OrthoFinder output from all 47 species
Adi_g078682	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
Ala_g16231	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
Als_g46996	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Aop_g04473	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
Ceric.37G056900.1	Ceric.37G056900	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Dac_g03831	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Dcu_g01903	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.07	OrthoFinder output from all 47 species
Dcu_g07725	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.06	OrthoFinder output from all 47 species
Dde_g20964	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.05	OrthoFinder output from all 47 species
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
LOC_Os01g43630.1	LOC_Os01g43630	large subunit beta of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
LOC_Os03g23950.1	LOC_Os03g23950	large subunit beta of AP-1 trans-Golgi network cargo...	0.07	OrthoFinder output from all 47 species
Lfl_g05633	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.04	OrthoFinder output from all 47 species
MA_10434151g0010	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Mp1g25810.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
Mp6g09050.1	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex	0.03	OrthoFinder output from all 47 species
Msp_g00711	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
Nbi_g10984	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005044	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.02	OrthoFinder output from all 47 species
Smo269184	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
Smo269763	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.04	OrthoFinder output from all 47 species
Spa_g12477	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
Spa_g16508	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.03	OrthoFinder output from all 47 species
Zm00001e001693_P001	Zm00001e001693	large subunit beta of AP-1 trans-Golgi network cargo...	0.06	OrthoFinder output from all 47 species
Zm00001e027916_P001	Zm00001e027916	large subunit beta of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
Zm00001e038184_P001	Zm00001e038184	large subunit beta of AP-1 trans-Golgi network cargo...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004107	chorismate synthase activity	IEP	HCCA
MF	GO:0004615	phosphomannomutase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009298	GDP-mannose biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019673	GDP-mannose metabolic process	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015151	B-adaptin_app_sub_C	727	843
IPR002553	Clathrin/coatomer_adapt-like_N	37	552

External Links

No external refs found!

Aev_g02524

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation