- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CP12, CP12-2
Description : regulatory protein *(CP12) of GAPDH activity & original description: none
Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g32821 | |
| Cluster | HCCA: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00175560 | CP12, CP12-2,... | Calvin cycle protein CP12-2, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g016914 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g048511 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g106137 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g00257 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g00251 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g10777 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene11309.t1 | CP12, CP12-2,... | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.15G075300.1 | CP12, CP12-2,... | regulatory protein *(CP12) of GAPDH activity & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G034600.1 | CP12, CP12-2,... | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03082 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g17531 | CP12-3 | regulatory protein *(CP12) of GAPDH activity & original... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_03515 | CP12, CP12-2 | Calvin cycle protein CP12-2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g19740.1 | CP12-1, CP12,... | Calvin cycle protein CP12-2, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g42311 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.08 | OrthoFinder output from all 47 species | |
| MA_524595g0010 | CP12, CP12-2 | Calvin cycle protein CP12-2, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Mp2g10550.1 | CP12-3 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g10264 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g01618 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g08879 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14932 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g05976 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c21_11130V3.1 | CP12-1, CP12,... | CP12 domain-containing protein 2 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g00117 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g04578 | CP12-1, CP12 | regulatory protein *(CP12) of GAPDH activity & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g09684 | CP12, CP12-2 | regulatory protein *(CP12) of GAPDH activity & original... | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e036178_P001 | CP12-1, CP12,... | Calvin cycle protein CP12-2, chloroplastic... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |