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  5. Dac_g23298

Dac_g23298


Description : 5,10-methenyl-THF synthetase & original description: none


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g23298

Target Alias Description ECC score Gene Family Method Actions
Ala_g06033 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010582 No alias 5,10-methenyl-THF synthetase & original description: CDS=1-1530 0.03 OrthoFinder output from all 47 species
Ceric.27G024200.1 Ceric.27G024200 5,10-methenyl-THF synthetase & original description:... 0.04 OrthoFinder output from all 47 species
Cre13.g587450 No alias Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
Nbi_g09827 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30533 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039459_P001 Zm00001e039459 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 401 468
IPR002698 FTHF_cligase 124 322
No external refs found!