Dac_g14878 (TWN3, RPS9)

Aliases : TWN3, RPS9

Description : component *(uS9c) of small plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002624_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g14878

Target	Alias	Description	ECC score	Gene Family Method
AT1G74970	TWN3, RPS9	ribosomal protein S9	0.04	OrthoFinder output from all 47 species
Adi_g023331	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Adi_g023332	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ala_g09988	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Aop_g12650	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Azfi_s0060.g034759	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g23661	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.15G045500.1	TWN3, RPS9,...	component *(uS9c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020912.92	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Dcu_g06113	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Dde_g12612	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ehy_g04376	TWN3, RPS9	not classified & original description: none	0.08	OrthoFinder output from all 47 species
GSVIVT01009628001	TWN3, RPS9	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
GSVIVT01036122001	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Gb_29571	TWN3, RPS9	30S ribosomal protein S9, chloroplastic OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_39922	TWN3, RPS9	30S ribosomal protein S9, chloroplastic OS=Spinacia...	0.05	OrthoFinder output from all 47 species
LOC_Os03g55930.1	TWN3, RPS9,...	component psRPS9 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Lfl_g06364	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_18349g0020	TWN3, RPS9	30S ribosomal protein S9, chloroplastic OS=Spinacia...	0.05	OrthoFinder output from all 47 species
Mp3g01740.1	TWN3, RPS9	component psRPS9 of small ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
Nbi_g00484	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Pnu_g19238	TWN3, RPS9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020559	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Sam_g15079	No alias	component *(uS9c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g15080	No alias	component *(uS9c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Smo17067	TWN3, RPS9	30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea	0.02	OrthoFinder output from all 47 species
Solyc04g079790.3.1	TWN3, RPS9,...	component psRPS9 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Spa_g04655	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Spa_g04656	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Spa_g31093	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Tin_g00437	TWN3, RPS9	component *(uS9c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Zm00001e005809_P002	TWN3, RPS9,...	component psRPS9 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000754	Ribosomal_S9	100	221

External Links

No external refs found!

Dac_g14878 (TWN3, RPS9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation