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  5. Dac_g12416

Dac_g12416


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12416
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00225p00023630 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AT1G01370 HTR12, CENH3 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.16 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G075200.1 Ceric.06G075200 histone *(H3) & original description: pacid=50619967... 0.03 OrthoFinder output from all 47 species
Ceric.10G013500.1 Ceric.10G013500 histone *(H3) & original description: pacid=50612923... 0.04 OrthoFinder output from all 47 species
Ceric.10G015500.1 Ceric.10G015500 histone *(H3) & original description: pacid=50612308... 0.04 OrthoFinder output from all 47 species
Ceric.12G022300.1 Ceric.12G022300 histone *(H3) & original description: pacid=50601599... 0.04 OrthoFinder output from all 47 species
Ceric.14G025000.1 Ceric.14G025000 histone *(H3) & original description: pacid=50634383... 0.04 OrthoFinder output from all 47 species
Ceric.14G043400.1 Ceric.14G043400 histone *(H3) & original description: pacid=50633664... 0.03 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.04 OrthoFinder output from all 47 species
Ceric.19G072300.1 Ceric.19G072300 histone *(H3) & original description: pacid=50576158... 0.04 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.04 OrthoFinder output from all 47 species
Ceric.1Z286600.1 Ceric.1Z286600 not classified & original description: pacid=50632714... 0.03 OrthoFinder output from all 47 species
Ceric.22G049100.1 Ceric.22G049100 histone H3 variant *(CENH3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G002400.1 Ceric.24G002400 histone *(H3) & original description: pacid=50629579... 0.03 OrthoFinder output from all 47 species
Ceric.27G025100.1 Ceric.27G025100 histone *(H3) & original description: pacid=50605832... 0.03 OrthoFinder output from all 47 species
Ceric.27G025200.1 Ceric.27G025200 histone *(H3) & original description: pacid=50606238... 0.04 OrthoFinder output from all 47 species
Ceric.27G026100.1 Ceric.27G026100 histone *(H3) & original description: pacid=50605944... 0.04 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.04 OrthoFinder output from all 47 species
Ceric.27G029300.1 Ceric.27G029300 histone *(H3) & original description: pacid=50605405... 0.04 OrthoFinder output from all 47 species
Ceric.27G029400.1 Ceric.27G029400 histone *(H3) & original description: pacid=50605419... 0.04 OrthoFinder output from all 47 species
Ceric.30G057000.1 Ceric.30G057000 histone *(H3) & original description: pacid=50609365... 0.04 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.02 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.06 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Dac_g01991 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11158 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.07 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.09 OrthoFinder output from all 47 species
LOC_Os03g27310.2 LOC_Os03g27310 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.1 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.08 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.09 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45428 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_561217g0010 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.02 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.08 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g07789 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c20_8550V3.1 Pp3c20_8550 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.09 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.08 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.08 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.09 OrthoFinder output from all 47 species
Solyc01g095650.4.1 HTR12, CENH3,... histone H3 variant (CENH3) 0.04 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.08 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.04 OrthoFinder output from all 47 species
Spa_g04339 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.15 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.17 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09717 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g43939 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001885_P003 Zm00001e001885 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.04 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.07 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e036599_P001 Zm00001e036599 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!