Aliases : ATF1, TRXF1
Description : F-type thioredoxin *(Trx-F) & original description: none
Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00119540 | ATF1, TRXF1,... | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.03 | OrthoFinder output from all 47 species | |
AT3G02730 | ATF1, TRXF1 | thioredoxin F-type 1 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g003203 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g102129 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g03766 | ATF1, TRXF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g06364 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g00422 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07635 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g02927 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene19335.t1 | ATF1, TRXF1,... | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene69737.t1 | TRXF2, ATF2,... | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s2245.g109976 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=10-579 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g12466 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ceric.37G049100.1 | ATHM4, TRX-M4,... | not classified & original description: pacid=50616292... | 0.04 | OrthoFinder output from all 47 species | |
Cre01.g066552 | ATTRX1, ATTRX H1, TRX1 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g496700 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g12181 | TRXF2, ATF2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25843 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g02038 | ATF1, TRXF1 | plastidial thioredoxin *(TrxL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01019070001 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.05 | OrthoFinder output from all 47 species | |
Gb_20154 | ATF1, TRXF1 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os01g68480.1 | TRXF2, ATF2,... | F-type thioredoxin | 0.05 | OrthoFinder output from all 47 species | |
Len_g18423 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g11575 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g17579 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_5229g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Mp2g20740.1 | ATF1, TRXF1 | F-type thioredoxin | 0.04 | OrthoFinder output from all 47 species | |
Mp3g08490.1 | ATF1, TRXF1 | F-type thioredoxin | 0.04 | OrthoFinder output from all 47 species | |
Msp_g29081 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Nbi_g02641 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g65672 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pnu_g12320 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g30576 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sam_g38377 | No alias | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo110708 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.02 | OrthoFinder output from all 47 species | |
Smo77812 | ATH5, ATTRX5, TRX5, LIV1 | No description available | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g056300.4.1 | ATF1, TRXF1,... | F-type thioredoxin | 0.03 | OrthoFinder output from all 47 species | |
Spa_g30029 | ACHT3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g51722 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g21213 | TRXF2, ATF2 | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
Zm00001e027512_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e040421_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0003333 | amino acid transmembrane transport | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003951 | NAD+ kinase activity | IEP | HCCA |
MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
BP | GO:0006741 | NADP biosynthetic process | IEP | HCCA |
BP | GO:0006865 | amino acid transport | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013766 | Thioredoxin_domain | 82 | 177 |
No external refs found! |