Dac_g05556 (emb2726)

Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: none

Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g05556

Target	Alias	Description	ECC score	Gene Family Method
AT4G29060	emb2726	elongation factor Ts family protein	0.04	OrthoFinder output from all 47 species
Adi_g053355	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Aev_g28882	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ala_g13148	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Ala_g21504	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ala_g30187	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Aob_g08834	emb2726	translation elongation factor *(EF-Ts) & original...	0.08	OrthoFinder output from all 47 species
Aop_g25286	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ceric.03G081000.1	emb2726, Ceric.03G081000	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Cre12.g519180	emb2726	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dde_g06930	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
Ehy_g05564	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Gb_29672	emb2726	EF-Ts translation elongation factor	0.02	OrthoFinder output from all 47 species
Len_g59815	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g09522	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
MA_10436165g0010	emb2726	EF-Ts translation elongation factor	0.04	OrthoFinder output from all 47 species
Msp_g12193	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Nbi_g14225	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ore_g00299	emb2726	translation elongation factor *(EF-Ts) & original...	0.07	OrthoFinder output from all 47 species
Ore_g08953	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Pnu_g11907	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Pnu_g13399	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g11585	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g29843	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022632	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Smo60716	emb2726	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Solyc07g018360.3.1	emb2726, Solyc07g018360	EF-Ts translation elongation factor	0.03	OrthoFinder output from all 47 species
Spa_g21728	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Tin_g03798	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e010912_P001	emb2726, Zm00001e010912	EF-Ts translation elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0034311	diol metabolic process	IEP	HCCA
BP	GO:0034312	diol biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014039	Transl_elong_EFTs/EF1B_dimer	74	179
IPR014039	Transl_elong_EFTs/EF1B_dimer	53	82

External Links

No external refs found!

Dac_g05556 (emb2726)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation