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  5. Cre17.g727100

Cre17.g727100


Description : Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component


Gene families : OG0007576 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g727100
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00064050 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
AT5G01590 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aop_g11610 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014908 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.01 OrthoFinder output from all 47 species
Ceric.26G055700.1 Ceric.26G055700 component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g01178 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Len_g09541 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Mp7g04260.1 No alias component Tic56 of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Nbi_g00777 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.01 OrthoFinder output from all 47 species
Pir_g10794 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011825 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Sam_g10370 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Smo76814 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Solyc09g013100.3.1 Solyc09g013100 component Tic56 of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR025640 GYF_2 145 193
No external refs found!