Cre07.g331500


Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component


Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g331500
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00194810 CLPR4,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00164p00068000 CLPR1, SVR2,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT4G17040 CLPR4 CLP protease R subunit 4 0.02 OrthoFinder output from all 47 species
Adi_g052191 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g087162 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g107013 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.01 OrthoFinder output from all 47 species
Aev_g07767 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Als_g00665 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Als_g01710 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aob_g01289 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013857 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g15422 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Cba_g25400 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001420.2 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020952.49 CLPR4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dac_g10911 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 OrthoFinder output from all 47 species
Dcu_g02591 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Dde_g03225 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dde_g21817 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
GSVIVT01003696001 CLPR4 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Gb_12676 No alias non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
LOC_Os03g22430.1 LOC_Os03g22430 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Lfl_g01084 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
MA_10429819g0020 CLPR1, SVR2, NCLPP5 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
MA_6114g0010 No alias ATP-dependent Clp protease proteolytic subunit-related... 0.06 OrthoFinder output from all 47 species
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
Mp7g03170.1 CLPR4 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Msp_g05047 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Nbi_g04693 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Nbi_g11210 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Pir_g11203 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Pir_g12837 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Pnu_g07357 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Pp3c26_8310V3.1 CLPR4, Pp3c26_8310 CLP protease R subunit 4 0.01 OrthoFinder output from all 47 species
Ppi_g13921 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004018 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Solyc08g077890.3.1 CLPR4, Solyc08g077890 non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
Solyc10g049710.2.1 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Zm00001e017288_P001 CLPR4, Zm00001e017288 non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 54 235
No external refs found!