1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre07.g314150

Cre07.g314150 (PDE181, ZDS, SPC1)


Aliases : PDE181, ZDS, SPC1

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g314150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00029180 PDE181, ZDS,... Secondary metabolism.terpenoids.terpenoid... 0.07 OrthoFinder output from all 47 species
AT3G04870 PDE181, ZDS, SPC1 zeta-carotene desaturase 0.01 OrthoFinder output from all 47 species
Ala_g10147 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g21819 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012159 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g18804 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.37G066700.1 PDE181, ZDS,... zeta-carotene desaturase *(ZDS) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.43 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
Dac_g43255 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12247 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13728 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g12341 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31655 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45433 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05500 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.06 OrthoFinder output from all 47 species
Mp5g14090.1 PDE181, ZDS, SPC1 zeta-carotene desaturase (ZDS) 0.1 OrthoFinder output from all 47 species
Msp_g40400 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g03042 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07998 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_7790V3.1 PDE181, ZDS,... zeta-carotene desaturase 0.02 OrthoFinder output from all 47 species
Ppi_g12002 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010946 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g25901 No alias zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo146971 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Solyc01g097810.3.1 PDE181, ZDS,... zeta-carotene desaturase (ZDS) 0.05 OrthoFinder output from all 47 species
Spa_g18923 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19386 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25123 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 88 560
No external refs found!