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  5. Cre06.g270350

Cre06.g270350 (BMY8, BAM3, CT-BMY)


Aliases : BMY8, BAM3, CT-BMY

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g270350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00205080 BAM1, BMY7,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00154460 BAM9, BMY3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Adi_g024852 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05070 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18488 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47527 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g15788 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G008700.1 BMY5, BAM6,... EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.19G001000.1 BMY8, BAM3,... EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.19G057400.1 BAM1, BMY7,... EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22361 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27496 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001863001 BAM1, BMY7, TR-BAMY Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
GSVIVT01014681001 BAM4, BMY6 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Gb_08421 BAM1, BMY7, TR-BAMY beta amylase 0.02 OrthoFinder output from all 47 species
Gb_14166 BMY8, BAM3, CT-BMY beta amylase 0.02 OrthoFinder output from all 47 species
Len_g08375 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432630g0020 BAM1, BMY7, TR-BAMY beta amylase 0.01 OrthoFinder output from all 47 species
MA_158054g0010 BAM4, BMY6 beta amylase 0.02 OrthoFinder output from all 47 species
Msp_g12589 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12142 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g26366 BAM9, BMY3 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29371 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018480 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: CDS=293-2071 0.03 OrthoFinder output from all 47 species
Sam_g07345 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28653 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02124 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02796 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002383_P001 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species
Zm00001e037830_P001 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 97 345
IPR001554 Glyco_hydro_14 400 547
No external refs found!