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Aliases : LIL3:1
Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein
Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre03.g199535 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00183350 | LIL3:1,... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G17600 | LIL3:1 | Chlorophyll A-B binding family protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g020993 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g10014 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g15592 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g32557 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene64163.t1 | LIL3:1, Aspi01Gene64163 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001642 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.20G033200.1 | LIL3:1, Ceric.20G033200 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g02634 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03144 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01003693001 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05189 | LIL3:1 | SEP3 LHC-related protein | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g03330.1 | LIL3:1, LOC_Os02g03330 | SEP3 LHC-related protein | 0.06 | OrthoFinder output from all 47 species | |
| MA_10427346g0010 | LIL3:1 | SEP3 LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17030.1 | LIL3:1 | SEP3 LHC-related protein | 0.15 | OrthoFinder output from all 47 species | |
| Ore_g28824 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17000 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g26847 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c2_19700V3.1 | LIL3:1, Pp3c2_19700 | Chlorophyll A-B binding family protein | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016040 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g15171 | No alias | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo106498 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc08g007180.3.1 | LIL3:1, Solyc08g007180 | SEP3 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g077880.3.1 | LIL3:1, Solyc08g077880 | SEP3 LHC-related protein | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16684 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16685 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013528_P001 | LIL3:1, Zm00001e013528 | SEP3 LHC-related protein | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |