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  5. Cre02.g073850

Cre02.g073850


No description available


Gene families : OG0004638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g073850
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00176870 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.02 OrthoFinder output from all 47 species
AT1G05385 Psb27-H1, LPA19 photosystem II 11 kDa protein-related 0.01 OrthoFinder output from all 47 species
Adi_g021001 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021002 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25834.t1 Psb27-H1, LPA19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33397 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34104 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37645 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17829 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017974001 Psb27-H1, LPA19 Photosystem II D1 precursor processing protein PSB27-H2,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53640.1 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.06 OrthoFinder output from all 47 species
Nbi_g04094 Psb27-H1, LPA19 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g08997 Psb27-H1, LPA19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30336 Psb27-H1, LPA19 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g38093 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026101 Psb27-H1, LPA19 not classified & original description: CDS=109-834 0.01 OrthoFinder output from all 47 species
Spa_g51028 Psb27-H1, LPA19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01505 Psb27-H1, LPA19 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e012045_P001 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 64 195
No external refs found!