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  5. Cre01.g044600

Cre01.g044600 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : Synaptotagmin-2 OS=Arabidopsis thaliana


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g044600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00090070 NTMC2T1.2, SYTB,... Synaptotagmin-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G20080 NTMC2T1.2, SYTB,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g012486 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Adi_g082961 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Adi_g110748 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03246 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ala_g17634 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.01 OrthoFinder output from all 47 species
Ala_g24226 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30304 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g02898 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07889 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15096.t1 NTMC2TYPE4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16883.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48117.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000647 NTMC2TYPE4, NTMC2T4 not classified & original description: CDS=365-1843 0.01 OrthoFinder output from all 47 species
Azfi_s0217.g058505 SYT5, NTMC2T2.1,... not classified & original description: CDS=917-1921 0.02 OrthoFinder output from all 47 species
Cba_g02633 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Dac_g15704 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01024034001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_10239 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Gb_36053 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55220.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Lfl_g28596 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10162068g0010 NTMC2TYPE1.1,... Synaptotagmin-1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10280179g0010 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10433495g0010 NTMC2TYPE4, NTMC2T4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09971 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15829 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05532 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Pp3c4_12110V3.1 SYT5, NTMC2T2.1,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Sam_g24830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101052 NTMC2TYPE4, NTMC2T4 Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo140025 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo77428 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo81096 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc01g111520.3.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species
Solyc08g021940.3.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc10g017590.3.1 NTMC2TYPE4,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc12g009790.2.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g09558 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g12221 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Tin_g20826 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.01 OrthoFinder output from all 47 species
Zm00001e002484_P001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e006764_P001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e010253_P001 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 709 899
No external refs found!