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  5. GSVIVT01036703001

GSVIVT01036703001 (EMB1135)


Aliases : EMB1135

Description : Protein FORGETTER 1 OS=Arabidopsis thaliana


Gene families : OG0002623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036703001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G79350 EMB1135 RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g021474 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16049 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08125 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre01.g053250 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre02.g095045 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre13.g578501 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g13353 EMB1135 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13213 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10954 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_10957 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52020.1 EMB1135, LOC_Os04g52020 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os04g52030.1 EMB1135, LOC_Os04g52030 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g12680.1 EMB1135, LOC_Os08g12680 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Lfl_g16816 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g14790.1 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g005490.4.1 EMB1135, Solyc10g005490 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g10872 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20769 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041616_P001 EMB1135, Zm00001e041616 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 784 1073
IPR039187 SNO_AAA 182 515
IPR019787 Znf_PHD-finger 695 743
No external refs found!