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  5. GSVIVT01030146001

GSVIVT01030146001


Description : Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana


Gene families : OG0001938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030146001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT4G12650 No alias Endomembrane protein 70 protein family 0.1 OrthoFinder output from all 47 species
AT5G35160 No alias Endomembrane protein 70 protein family 0.09 OrthoFinder output from all 47 species
Adi_g014931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G022900.1 Ceric.26G022900 not classified & original description: pacid=50600157... 0.02 OrthoFinder output from all 47 species
Ceric.30G004200.1 Ceric.30G004200 not classified & original description: pacid=50608321... 0.05 OrthoFinder output from all 47 species
Ceric.39G060600.1 Ceric.39G060600 not classified & original description: pacid=50582436... 0.06 OrthoFinder output from all 47 species
Cre12.g494350 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g07323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19738 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g07031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09059 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os02g49050.2 LOC_Os02g49050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os02g55440.2 LOC_Os02g55440 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g07650.1 LOC_Os05g07650 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428354g0010 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_371g0020 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp6g10640.1 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g03216 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09732 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc07g007030.1.1 Solyc07g007030 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g056050.1.1 Solyc07g056050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc12g010390.2.1 Solyc12g010390 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e016131_P001 Zm00001e016131 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 139 198
IPR004240 EMP70 201 273
IPR004240 EMP70 68 140
No external refs found!