1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029510001

GSVIVT01029510001


Description : Secondary metabolism.terpenoids.terpenoid synthesis.triterpenoid synthase


Gene families : OG0000781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029510001
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.19 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
GSVIVT01015994001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01029481001 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01029482001 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
GSVIVT01029489001 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
GSVIVT01029525001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
LOC_Os11g18194.1 CAS1, LOC_Os11g18194 triterpenoid synthase 0.04 OrthoFinder output from all 47 species
LOC_Os11g18366.2 CAS1, LOC_Os11g18366 triterpenoid synthase 0.04 OrthoFinder output from all 47 species
MA_10270015g0010 CAS1 triterpenoid synthase. cycloartenol synthase 0.03 OrthoFinder output from all 47 species
MA_643312g0010 CAS1 triterpenoid synthase 0.05 OrthoFinder output from all 47 species
MA_960985g0010 CAS1 triterpenoid synthase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 471 809
IPR032697 SQ_cyclase_N 155 421
No external refs found!