GSVIVT01028052001 (emb2386)

Aliases : emb2386

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component

Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01028052001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00091p00066640	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT1G02780	emb2386	Ribosomal protein L19e family protein	0.09	OrthoFinder output from all 47 species
Aev_g08905	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g04322	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g28989	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g06897	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g03394	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g14682	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Cba_g12572	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cba_g12573	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.07G087100.1	Ceric.07G087100	component *(eL19) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ceric.17G056200.1	Ceric.17G056200	component *(eL19) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021181.1	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre02.g075700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g35194	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ehy_g07437	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g08169	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Gb_23171	emb2386	component RPL19 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Gb_23172	No alias	component RPL19 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g21940.1	emb2386, LOC_Os03g21940	component RPL19 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os03g38260.1	LOC_Os03g38260	component RPL19 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Lfl_g30375	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_1839g0010	emb2386	component RPL19 of LSU proteome component	0.07	OrthoFinder output from all 47 species
MA_22977g0010	emb2386	component RPL19 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Mp7g09050.1	No alias	component RPL19 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Msp_g06900	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Msp_g18967	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g44205	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pir_g59999	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c15_5130V3.1	Pp3c15_5130	Ribosomal protein L19e family protein	0.06	OrthoFinder output from all 47 species
Pp3c16_410V3.1	Pp3c16_410	Ribosomal protein L19e family protein	0.05	OrthoFinder output from all 47 species
Pp3c21_11230V3.1	Pp3c21_11230	Ribosomal protein L19e family protein	0.07	OrthoFinder output from all 47 species
Pp3c22_9980V3.1	Pp3c22_9980	Ribosomal protein L19e family protein	0.04	OrthoFinder output from all 47 species
Pp3c9_14720V3.1	Pp3c9_14720	Ribosomal protein L19e family protein	0.09	OrthoFinder output from all 47 species
Ppi_g01823	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g28399	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001949	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005282	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Sam_g25834	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g38378	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Smo271656	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Solyc06g009210.4.1	emb2386, Solyc06g009210	component RPL19 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc09g075430.3.1	Solyc09g075430	component RPL19 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Spa_g11535	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Spa_g11536	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Tin_g03158	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Zm00001e013683_P001	emb2386, Zm00001e013683	component RPL19 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e020524_P001	emb2386, Zm00001e020524	component RPL19 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Zm00001e025202_P001	Zm00001e025202	component RPL19 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Zm00001e036280_P001	Zm00001e036280	component RPL19 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004743	pyruvate kinase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0030955	potassium ion binding	IEP	HCCA
MF	GO:0031420	alkali metal ion binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000196	Ribosomal_L19/L19e	1	113

External Links

No external refs found!

GSVIVT01028052001 (emb2386)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation