1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01025473001

GSVIVT01025473001 (OVA5, ATKRS-2)


Aliases : OVA5, ATKRS-2

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase


Gene families : OG0005865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005865_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025473001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00093330 OVA5, ATKRS-2,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.09 OrthoFinder output from all 47 species
AT3G13490 OVA5, ATKRS-2 Lysyl-tRNA synthetase, class II 0.03 OrthoFinder output from all 47 species
Adi_g081278 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14493 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21504 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011549 OVA5, ATKRS-2 lysine-tRNA ligase & original description: CDS=158-1798 0.05 OrthoFinder output from all 47 species
Ceric.19G049100.1 OVA5, ATKRS-2,... lysine-tRNA ligase & original description:... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001164.1 OVA5, ATKRS-2 No description available 0.04 OrthoFinder output from all 47 species
Dac_g21585 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11670 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13671 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05325 OVA5, ATKRS-2 lysine-tRNA ligase 0.11 OrthoFinder output from all 47 species
LOC_Os02g41470.3 OVA5, ATKRS-2,... lysine-tRNA ligase 0.14 OrthoFinder output from all 47 species
Len_g27813 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18377 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Mp7g09810.1 OVA5, ATKRS-2 lysine-tRNA ligase 0.12 OrthoFinder output from all 47 species
Msp_g11060 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08031 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15615 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65469 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03084 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15740 No alias lysine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Smo79851 OVA5, ATKRS-2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder output from all 47 species
Spa_g30430 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11471 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006285_P003 OVA5, ATKRS-2,... lysine-tRNA ligase 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 221 588
IPR004365 NA-bd_OB_tRNA 126 203
No external refs found!