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  5. GSVIVT01024910001

GSVIVT01024910001 (RCA)


Aliases : RCA

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase


Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024910001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00255830 RCA,... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.09 OrthoFinder output from all 47 species
AT2G39730 RCA rubisco activase 0.19 OrthoFinder output from all 47 species
Adi_g007841 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Adi_g056176 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Adi_g060599 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Adi_g079810 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Aev_g12706 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Aev_g40934 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.05 OrthoFinder output from all 47 species
Ala_g04126 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Ala_g06980 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Als_g03717 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Als_g07530 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Aob_g25713 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Aob_g26956 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.02 OrthoFinder output from all 47 species
Aop_g12628 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.13 OrthoFinder output from all 47 species
Aop_g12629 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Aspi01Gene46212.t1 RCA, Aspi01Gene46212 ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66678.t1 RCA, Aspi01Gene66678 ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000197 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Azfi_s0007.g011067 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Cba_g02574 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Cba_g15232 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Cba_g69697 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Ceric.12G094300.1 RCA, Ceric.12G094300 ATP-dependent activase involved in RuBisCo regulation &... 0.14 OrthoFinder output from all 47 species
Ceric.12G094500.1 RCA, Ceric.12G094500 ATP-dependent activase involved in RuBisCo regulation &... 0.17 OrthoFinder output from all 47 species
Ceric.12G094700.1 RCA, Ceric.12G094700 ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Ceric.12G094800.1 RCA, Ceric.12G094800 ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Ceric.28G001900.1 RCA, Ceric.28G001900 ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Ceric.28G002100.1 RCA, Ceric.28G002100 ATP-dependent activase involved in RuBisCo regulation &... 0.14 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.90 RCA Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.91 RCA Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 OrthoFinder output from all 47 species
Cre04.g229300 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Dac_g08800 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Dac_g13179 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.11 OrthoFinder output from all 47 species
Dcu_g18051 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Dcu_g42045 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Dde_g08345 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.05 OrthoFinder output from all 47 species
Dde_g18636 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Ehy_g03611 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.11 OrthoFinder output from all 47 species
Ehy_g15758 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Gb_37968 RCA ATP-dependent activase involved in RuBisCo regulation 0.09 OrthoFinder output from all 47 species
LOC_Os11g47970.1 RCA, LOC_Os11g47970 ATP-dependent activase involved in RuBisCo regulation 0.13 OrthoFinder output from all 47 species
Len_g17744 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Len_g24593 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Lfl_g05580 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Lfl_g10261 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
MA_10433855g0010 RCA ATP-dependent activase involved in RuBisCo regulation 0.09 OrthoFinder output from all 47 species
Mp3g03990.1 RCA ATP-dependent activase involved in RuBisCo regulation 0.08 OrthoFinder output from all 47 species
Msp_g06782 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Msp_g10333 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.17 OrthoFinder output from all 47 species
Nbi_g09928 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Nbi_g20650 RCA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25439 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.05 OrthoFinder output from all 47 species
Ore_g04065 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Ore_g20242 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Ore_g25744 RCA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35469 RCA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g08208 RCA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23735 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Pir_g41355 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Pir_g66480 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Pnu_g24705 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Pp3c22_12960V3.1 RCA, Pp3c22_12960 rubisco activase 0.01 OrthoFinder output from all 47 species
Ppi_g15847 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.06 OrthoFinder output from all 47 species
Ppi_g29886 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Sam_g09791 No alias ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Sam_g28273 No alias ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Sam_g28274 No alias ATP-dependent activase involved in RuBisCo regulation &... 0.11 OrthoFinder output from all 47 species
Sam_g28275 No alias ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Sam_g38765 No alias ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Smo268623 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.16 OrthoFinder output from all 47 species
Solyc09g011080.3.1 RCA, Solyc09g011080 ATP-dependent activase involved in RuBisCo regulation 0.03 OrthoFinder output from all 47 species
Solyc10g086580.2.1 RCA, Solyc10g086580 ATP-dependent activase involved in RuBisCo regulation 0.12 OrthoFinder output from all 47 species
Spa_g05667 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Spa_g05668 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Spa_g29802 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Tin_g03996 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Tin_g07636 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.11 OrthoFinder output from all 47 species
Zm00001e020928_P001 RCA, Zm00001e020928 ATP-dependent activase involved in RuBisCo regulation 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 163 304
No external refs found!