1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01023906001

GSVIVT01023906001


Description : Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (LHT-type)


Gene families : OG0003545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003545_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023906001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00244480 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
Als_g11976 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05213 No alias amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02968.t1 Aspi01Gene02968 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55124.t1 Aspi01Gene55124 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09420 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12161 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25615 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023905001 No alias Solute transport.carrier-mediated transport.APC... 0.01 OrthoFinder output from all 47 species
MA_141g0010 No alias amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Nbi_g11797 No alias amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g26639 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04722 No alias amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18946 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08803 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo98878 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc01g111980.3.1 Solyc01g111980 amino acid transporter (LHT) 0.1 OrthoFinder output from all 47 species
Solyc04g079560.3.1 Solyc04g079560 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e041487_P001 Zm00001e041487 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 102 510
No external refs found!