GSVIVT01020151001 (MMP)

Aliases : MMP

Description : Protein degradation.peptidase families.metallopeptidase activities.Matrixin-type metalloprotease

Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01020151001
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00201730	MMP,...	Protein degradation.peptidase families.metallopeptidase...	0.14	OrthoFinder output from all 47 species
AMTR_s00106p00141160	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder output from all 47 species
AT1G24140	No alias	Matrixin family protein	0.07	OrthoFinder output from all 47 species
AT4G16640	No alias	Matrixin family protein	0.03	OrthoFinder output from all 47 species
Adi_g060237	MMP	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0187.g056745	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ehy_g30544	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
GSVIVT01018206001	No alias	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
Gb_17716	No alias	Matrixin-type metalloprotease	0.09	OrthoFinder output from all 47 species
LOC_Os02g50730.1	MMP, LOC_Os02g50730	Matrixin-type metalloprotease	0.07	OrthoFinder output from all 47 species
LOC_Os06g13180.1	MMP, LOC_Os06g13180	Matrixin-type metalloprotease	0.05	OrthoFinder output from all 47 species
MA_10426152g0010	No alias	Matrixin-type metalloprotease	0.06	OrthoFinder output from all 47 species
Pir_g41391	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Smo110370	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Solyc04g005040.1.1	Solyc04g005040	Matrixin-type metalloprotease	0.1	OrthoFinder output from all 47 species
Solyc04g005050.1.1	Solyc04g005050	Matrixin-type metalloprotease	0.14	OrthoFinder output from all 47 species
Tin_g08223	MMP	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Zm00001e015780_P001	MMP, Zm00001e015780	Matrixin-type metalloprotease	0.05	OrthoFinder output from all 47 species
Zm00001e036059_P001	MMP, Zm00001e036059	Matrixin-type metalloprotease	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031012	extracellular matrix	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001818	Pept_M10_metallopeptidase	146	193
IPR002477	Peptidoglycan-bd-like	70	122
IPR001818	Pept_M10_metallopeptidase	199	258

External Links

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GSVIVT01020151001 (MMP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation