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  5. GSVIVT01020046001

GSVIVT01020046001


No description available


Gene families : OG0000641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020046001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Aev_g34478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06219.t1 Aspi01Gene06219 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26948.t1 Aspi01Gene26948 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0617.g079545 No alias not classified & original description: CDS=26-442 0.02 OrthoFinder output from all 47 species
Ceric.01G118300.1 Ceric.01G118300 not classified & original description: pacid=50591452... 0.04 OrthoFinder output from all 47 species
Ceric.09G015400.1 Ceric.09G015400 not classified & original description: pacid=50586968... 0.03 OrthoFinder output from all 47 species
Ceric.25G031900.1 Ceric.25G031900 not classified & original description: pacid=50594252... 0.03 OrthoFinder output from all 47 species
Dac_g35798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011364001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g12054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438505 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002372 PQQ_repeat 370 493
IPR002372 PQQ_repeat 77 260
No external refs found!