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  5. GSVIVT01020033001

GSVIVT01020033001 (ATHB13)


Aliases : ATHB13

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020033001

Target Alias Description ECC score Gene Family Method Actions
AT1G27045 No alias Homeobox-leucine zipper protein family 0.03 OrthoFinder output from all 47 species
AT3G01220 ATHB20, HB20 homeobox protein 20 0.05 OrthoFinder output from all 47 species
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.04 OrthoFinder output from all 47 species
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 OrthoFinder output from all 47 species
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 OrthoFinder output from all 47 species
AT5G53980 ATHB52, HB52 homeobox protein 52 0.04 OrthoFinder output from all 47 species
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.04 OrthoFinder output from all 47 species
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.01 OrthoFinder output from all 47 species
Adi_g020723 HB51, ATHB51, LMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054811 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g054904 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g082074 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g116604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10824 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g10993 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g31935 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Aob_g11711 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g13559 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07957.t1 ATHB13, Aspi01Gene07957 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38379.t1 HB6, ATHB6,... regulatory protein *(LMI1) of floral meristem identity... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53135.t1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g03981 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g26585 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g78295 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G007200.1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G054300.1 ATHB16, HB16,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G061300.1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17323 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02341 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ehy_g09808 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ehy_g23915 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027407001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_04698 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os02g43330.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os10g26500.1 ATHB13, LOC_Os10g26500 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Len_g45930 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g51073 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g03884 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_10428916g0010 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_128g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_19453g0040 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Nbi_g13843 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03347 No alias regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ore_g29472 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ore_g34076 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g38546 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g45630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28211 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g29089 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Pnu_g32938 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g010600.4.1 AtHB23, HB23,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Solyc02g086930.4.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc02g087840.3.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e000532_P002 ATHB13, Zm00001e000532 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e004824_P001 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e038901_P001 ATHB13, Zm00001e038901 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 130 170
IPR001356 Homeobox_dom 75 128
No external refs found!