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  5. GSVIVT01018821001

GSVIVT01018821001


Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR chaperone (CPP1)


Gene families : OG0002327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018821001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G51140 No alias Protein of unknown function (DUF3353) 0.04 OrthoFinder output from all 47 species
Ceric.17G028900.1 Ceric.17G028900 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.04 OrthoFinder output from all 47 species
Ceric.18G061300.1 CDF1, Ceric.18G061300 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Dac_g43690 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Gb_19808 No alias light-dependent protochlorophyllide oxidoreductase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g21250.1 CDF1, LOC_Os09g21250 light-dependent protochlorophyllide oxidoreductase... 0.06 OrthoFinder output from all 47 species
Mp4g06910.1 CDF1 light-dependent protochlorophyllide oxidoreductase... 0.04 OrthoFinder output from all 47 species
Sam_g17385 No alias chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Solyc02g062350.3.1 Solyc02g062350 light-dependent protochlorophyllide oxidoreductase... 0.04 OrthoFinder output from all 47 species
Solyc03g114470.2.1 CDF1, Solyc03g114470 light-dependent protochlorophyllide oxidoreductase... 0.05 OrthoFinder output from all 47 species
Zm00001e034018_P002 CDF1, Zm00001e034018 light-dependent protochlorophyllide oxidoreductase... 0.05 OrthoFinder output from all 47 species
Zm00001e038554_P001 Zm00001e038554 light-dependent protochlorophyllide oxidoreductase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021788 CPP1-like 105 282
No external refs found!