GSVIVT01016575001 (OVA1)


Aliases : OVA1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase


Gene families : OG0004238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016575001

Target Alias Description ECC score Gene Family Method Actions
Ala_g10623 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16251 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12932 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048786 OVA1 methionine-tRNA ligase & original description: CDS=1-1698 0.02 OrthoFinder output from all 47 species
Cba_g70167 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G028400.1 OVA1, Ceric.28G028400 methionine-tRNA ligase & original description:... 0.14 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000607.15 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.1 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Cre12.g487100 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Dcu_g48825 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07779 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24980 OVA1 Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os03g11120.1 OVA1, LOC_Os03g11120 methionine-tRNA ligase 0.13 OrthoFinder output from all 47 species
Lfl_g07353 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432167g0010 OVA1 methionine-tRNA ligase 0.03 OrthoFinder output from all 47 species
MA_10434323g0010 OVA1 Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.03 OrthoFinder output from all 47 species
Mp2g16770.1 OVA1 methionine-tRNA ligase 0.1 OrthoFinder output from all 47 species
Msp_g13262 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11084 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25309 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05249 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g31725 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016381 OVA1 methionine-tRNA ligase & original description: CDS=128-1948 0.06 OrthoFinder output from all 47 species
Smo154280 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder output from all 47 species
Solyc05g054600.3.1 OVA1, Solyc05g054600 methionine-tRNA ligase 0.06 OrthoFinder output from all 47 species
Spa_g39108 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000706_P004 OVA1, Zm00001e000706 methionine-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 458 601
IPR002300 aa-tRNA-synth_Ia 59 121
IPR015413 Methionyl/Leucyl_tRNA_Synth 203 429
No external refs found!