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  5. GSVIVT01015593001

GSVIVT01015593001 (SKOR)


Aliases : SKOR

Description : Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK-type)


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015593001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00197870 AKT3, AKT2/3,... Solute transport.channels.VIC superfamily.voltage-gated... 0.04 OrthoFinder output from all 47 species
AT4G32650 AtLKT1, KC1, KAT3, ATKC1 potassium channel in Arabidopsis thaliana 3 0.03 OrthoFinder output from all 47 species
AT5G37500 GORK gated outwardly-rectifying K+ channel 0.03 OrthoFinder output from all 47 species
AT5G46240 KAT1 potassium channel in Arabidopsis thaliana 1 0.05 OrthoFinder output from all 47 species
Ala_g14619 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64705.t1 SKOR, Aspi01Gene64705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre06.g278111 ATAKT1, AKT1, KT1 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035748001 AtLKT1, KC1, KAT3, ATKC1 Solute transport.channels.VIC superfamily.voltage-gated... 0.06 OrthoFinder output from all 47 species
Gb_06791 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
LOC_Os06g14030.1 SKOR, LOC_Os06g14030 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
LOC_Os06g14310.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
MA_12718g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15180 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Msp_g15851 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Sam_g36087 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Solyc01g010080.3.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species
Solyc03g097940.3.1 SKOR, Solyc03g097940 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.09 OrthoFinder output from all 47 species
Solyc05g051220.3.1 SKOR, Solyc05g051220 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Solyc11g011500.2.1 SKOR, Solyc11g011500 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species
Tin_g32450 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Zm00001e020320_P001 ATAKT1, AKT1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Zm00001e029028_P001 KAT1, Zm00001e029028 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Zm00001e032909_P001 ATAKT1, AKT1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 561 649
IPR005821 Ion_trans_dom 89 334
IPR000595 cNMP-bd_dom 430 513
IPR021789 KHA_dom 762 831
No external refs found!