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  5. GSVIVT01015365001

GSVIVT01015365001 (PRORP1)


Aliases : PRORP1

Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P


Gene families : OG0002292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015365001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00150030 PRORP1,... RNA processing.ribonuclease activities.RNase P... 0.04 OrthoFinder output from all 47 species
AT2G32230 PRORP1 proteinaceous RNase P 1 0.14 OrthoFinder output from all 47 species
Als_g18782 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18399 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044548 PRORP1 protein-only ribonuclease *(RNase P) & original... 0.11 OrthoFinder output from all 47 species
Ceric.37G064300.1 PRORP3, Ceric.37G064300 protein-only ribonuclease *(RNase P) & original... 0.09 OrthoFinder output from all 47 species
Cre13.g563850 PRORP3 RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species
Dcu_g23240 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30543 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26548 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g17360.1 PRORP1, LOC_Os02g17360 protein-only ribonuclease (RNase P) 0.14 OrthoFinder output from all 47 species
Len_g09208 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02264 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429392g0010 PRORP1 protein-only ribonuclease (RNase P) 0.03 OrthoFinder output from all 47 species
MA_10437063g0010 PRORP1 protein-only ribonuclease (RNase P) 0.03 OrthoFinder output from all 47 species
Mp4g06160.1 PRORP1 protein-only ribonuclease (RNase P) 0.04 OrthoFinder output from all 47 species
Nbi_g08266 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13984 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35195 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26462 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
Smo80247 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species
Solyc07g019650.4.1 PRORP1, Solyc07g019650 protein-only ribonuclease (RNase P) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR031595 PRORP_C 429 653
IPR033443 PPR_long 239 386
IPR033443 PPR_long 108 170
No external refs found!