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  5. GSVIVT01014252001

GSVIVT01014252001 (AGO1)


Aliases : AGO1

Description : Protein argonaute 1B OS=Oryza sativa subsp. japonica


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014252001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00049370 AGO1,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Adi_g089102 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08087 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_71066g0010 AGO4, OCP11 Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR014811 ArgoL1 95 129
IPR003100 PAZ_dom 135 243
IPR003165 Piwi 327 427
No external refs found!