GSVIVT01014155001

Description : Disease resistance protein At4g27190 OS=Arabidopsis thaliana

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01014155001
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00183610	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
Aev_g06771	RPS5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017017001	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
GSVIVT01017023001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.04	OrthoFinder output from all 47 species
GSVIVT01017143001	RPS5	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01034250001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01034252001	No alias	Probable disease resistance protein At1g61300...	0.03	OrthoFinder output from all 47 species
GSVIVT01038386001	RPS5	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038446001	No alias	Probable disease resistance protein At1g52660...	0.03	OrthoFinder output from all 47 species
Gb_12859	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
LOC_Os11g36410.1	RPS5, LOC_Os11g36410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10428204g0010	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
MA_13844g0010	RPS5	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_178357g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_48202g0010	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
MA_502346g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_5551624g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_8348g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_91465g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g33523	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g48677	RPS5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo110652	No alias	Probable disease resistance protein At1g61310...	0.03	OrthoFinder output from all 47 species
Solyc02g036270.4.1	Solyc02g036270	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
Zm00001e019557_P001	Zm00001e019557	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	1	177

External Links

No external refs found!

GSVIVT01014155001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation