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  5. GSVIVT01014103001

GSVIVT01014103001 (TBL38)


Aliases : TBL38

Description : Protein trichome birefringence-like 38 OS=Arabidopsis thaliana


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014103001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266250 TBL20,... Protein trichome birefringence-like 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00121970 TBL37,... Protein trichome birefringence-like 37 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00123440 TBL31,... Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00032550 TBL35,... Protein trichome birefringence-like 35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00112880 TBL27,... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
AT4G23790 TBL24 TRICHOME BIREFRINGENCE-LIKE 24 0.04 OrthoFinder output from all 47 species
Adi_g105722 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27444 TBL23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29207 TBL27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58573 TBL16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06983 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15401 TBL16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62332 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04683.t1 TBL18, Aspi01Gene04683 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17899.t1 TBL6, Aspi01Gene17899 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene26562.t1 TBL16, Aspi01Gene26562 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30810.t1 TBL25, Aspi01Gene30810 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29961 TBL12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G031000.1 YLS7, TBL17,... not classified & original description: pacid=50581478... 0.03 OrthoFinder output from all 47 species
Dac_g30478 TBL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02163 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000843001 TBL38 Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01003789001 TBL14 Protein trichome birefringence-like 14 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01036469001 TBL19 Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_25866 TBL25 mannan O-acetyltransferase (MOAT) 0.04 OrthoFinder output from all 47 species
Gb_34157 TBL1 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18140.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39350.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12820.1 TBL22, LOC_Os06g12820 Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g16200.1 TBL20, LOC_Os06g16200 Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os12g33194.1 TBL16, LOC_Os12g33194 Protein trichome birefringence-like 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g15770 TBL26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19594 YLS7, TBL17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03917 TBL18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_2603g0010 TBL36 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Msp_g22119 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Ppi_g03439 TBL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16905 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60881 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010869 TBL24 not classified & original description: CDS=468-1670 0.02 OrthoFinder output from all 47 species
Sam_g18097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g082950.3.1 TBL34, Solyc02g082950 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
Solyc06g050920.4.1 TBL33, Solyc06g050920 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
Solyc07g062210.4.1 TBL37, Solyc07g062210 Protein trichome birefringence-like 37 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e009300_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
Zm00001e036803_P001 TBL19, Zm00001e036803 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 9 100
No external refs found!