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  5. GSVIVT01011781001

GSVIVT01011781001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0005321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011781001

Target Alias Description ECC score Gene Family Method Actions
Adi_g051871 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02456 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13953 No alias subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Als_g01878 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24507 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G078800.1 Ceric.18G078800 subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g01707 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Len_g11882 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05491 No alias subfamily ABCG transporter & original description: none 0.09 OrthoFinder output from all 47 species
MA_1921778g0010 No alias ABC transporter G family member 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g06753 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42961 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g008350.3.1 Solyc05g008350 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Spa_g15739 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 97 249
IPR013525 ABC_2_trans 398 609
No external refs found!