Sequence Description Alias PCC hrr GSVIVT01032853001 Protein modification.peptide maturation.plastid.EGY protease ATEGY2, EGY2 0.941595636910514 4 GSVIVT01017719001 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.937983666005714 3 GSVIVT01033392001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor NDF5 NDF5 0.9300040496844103 6 GSVIVT01024119001 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana MRL1 0.9261378677930973 26 GSVIVT01035975001 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana PGR3 0.9257351625913721 7 GSVIVT01027488001 0.9249175760084316 6 GSVIVT01031911001 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.9236644142306646 52 GSVIVT01034651001 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.9223263661023676 8 GSVIVT01018036001 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) CLH2, ATCLH2 0.9219390218376216 9 GSVIVT01036484001 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana 0.9212216275098063 10 GSVIVT01010855001 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor CIA2 0.9196290451305841 11 GSVIVT01017340001 PIFI 0.9150968623841228 37 GSVIVT01010149001 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein 0.9143178035648188 13 GSVIVT01024780001 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter ANTR1, PHT4;1 0.911595669846408 34 GSVIVT01031251001 Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana LPA66 0.9114847039964725 55 GSVIVT01029706001 0.9108618986630949 16 GSVIVT01001828001 0.9100784238985798 25 GSVIVT01026351001 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP1/TAC3 component PTAC3 0.9055953363533383 39 GSVIVT01029948001 Protein modification.peptide maturation.plastid.EGY protease EGY1 0.9007914917931196 92 GSVIVT01000148001 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RNC1 ribonuclease 0.8999001781598063 54 GSVIVT01000079001 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 695.3) 0.8993799042477449 21 GSVIVT01028249001 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8992041900741122 92 GSVIVT01030117001 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 165.3) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8988382510007386 92 GSVIVT01025500001 0.8987631563112015 59 GSVIVT01031001001 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS1 splicing factor ATCRS1, CRS1 0.8978714869726448 25 GSVIVT01033559001 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana 0.8977827956927374 26 GSVIVT01008654001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase 0.8970446906374122 27 GSVIVT01009800001 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica CPSAR1, EMB269, ATOBGC 0.8959072969451495 99 GSVIVT01017471001 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component PTAC17 0.8937676895845835 29 GSVIVT01036186001 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana 0.8928586613392413 53 GSVIVT01011946001 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) MAP1C, MAP1B 0.8916017466794843 100 GSVIVT01000162001 Probable esterase KAI2 OS=Arabidopsis thaliana 0.8910349763184696 35 GSVIVT01033109001 0.8905070887479624 70 GSVIVT01008186001 Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis thaliana 0.8899323861666467 36 GSVIVT01038203001 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 244.7) & UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana SGT1, ATSAGT1, SAGT1, GT, UGT74F2 0.8898306649260759 64 GSVIVT01028045001 Putative GTP diphosphokinase RSH1, chloroplastic OS=Arabidopsis thaliana RSH1, ATRSH1, AT-RSH1 0.8897300151155239 38 GSVIVT01020809001 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8883031654684767 66 GSVIVT01012177001 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpF adaptor component 0.8880655894131527 41 GSVIVT01018303001 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana 0.8870821551442138 60 GSVIVT01033190001 Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OTP82 0.8869021290096376 72 GSVIVT01019947001 0.8839024427135456 48 GSVIVT01007844001 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP2/TAC2 component PTAC2 0.8836338369694862 49 GSVIVT01023918001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase EMB86, EMB1030, EMB263 0.88325412417293 70 GSVIVT01008965001 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana 0.881709098918312 53 GSVIVT01035858001 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6 0.8804680598512197 89 GSVIVT01008227001 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana CHUP1 0.8801973209985924 59 GSVIVT01012626001 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.regulatory pyruvate orthophosphate dikinase kinase ATRP1, RP1 0.8793161576463185 61 GSVIVT01008451001 0.8787892783077268 63 GSVIVT01014050001 Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana 0.877121171891744 65 GSVIVT01038263001 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.8769365998491799 67 GSVIVT01012065001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8758821926326974 92 GSVIVT01009227001 Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana CRR22 0.8758339050231204 86 GSVIVT01035899001 0.8757459962465437 71 GSVIVT01031009001 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.CRS2 component 0.8756397430665749 73 GSVIVT01037384001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.NFS2 cysteine desulfurase component ATSUFS, CPNIFS, ATNFS2, SUFS, ATCPNIFS 0.8755683589784391 74 GSVIVT01032721001 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana 0.8745876884642506 75 GSVIVT01008414001 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.873572120472844 83 GSVIVT01020091001 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CRR28 RNA editing factor CRR28 0.873295649206062 80 GSVIVT01010764001 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Arabidopsis thaliana 0.8729328736741689 81 GSVIVT01003493001 Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana SVR7 0.8715563771824444 83 GSVIVT01017677001 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana EMB2750 0.8707767359788587 84 GSVIVT01031113001 PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana 0.8698447514873131 86 GSVIVT01015331001 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.CAF component ATCAF1, CAF1 0.8695070447097583 88 GSVIVT01024722001 Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NDA-type NAD(P)H dehydrogenase ATNDI1, NDA1 0.8690592080285817 90 GSVIVT01011479001 Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana 0.8683484537162176 92 GSVIVT01011705001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR3 0.8682099544301898 94 GSVIVT01014263001 0.8679921683721572 100 GSVIVT01011078001 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana 0.8668313273573024 99 GSVIVT01000178001 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.OTP80 RNA editing factor 0.8667266003039961 100