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  5. GSVIVT01010018001

GSVIVT01010018001


Description : PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010018001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00074520 evm_27.TU.AmTr_v1... PsbP domain-containing protein 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.11 OrthoFinder output from all 47 species
Adi_g018578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g31777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01112 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08421 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene57620.t1 Aspi01Gene57620 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57621.t1 Aspi01Gene57621 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0384.g067468 No alias not classified & original description: CDS=106-1002 0.04 OrthoFinder output from all 47 species
Cba_g10334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.35G021700.1 Ceric.35G021700 not classified & original description: pacid=50580848... 0.03 OrthoFinder output from all 47 species
Cre03.g198950 No alias PsbP domain-containing protein 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g14466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os12g08830.1 LOC_Os12g08830 PsbP domain-containing protein 4, chloroplastic... 0.12 OrthoFinder output from all 47 species
Len_g04660 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g35597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428945g0010 No alias PsbP domain-containing protein 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp1g26600.1 No alias PsbP domain-containing protein 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g02718 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26017 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g01184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05874 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g16097 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g07734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19157 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 135 278
No external refs found!