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  5. GSVIVT01009563001

GSVIVT01009563001


No description available


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009563001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT2G26530 AR781 Protein of unknown function (DUF1645) 0.05 OrthoFinder output from all 47 species
Adi_g056418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06192.t1 Aspi01Gene06192 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06336.t1 Aspi01Gene06336 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08804.t1 Aspi01Gene08804 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19387.t1 Aspi01Gene19387 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24810.t1 Aspi01Gene24810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32494.t1 Aspi01Gene32494 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32694.t1 Aspi01Gene32694 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42335.t1 Aspi01Gene42335 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42339.t1 Aspi01Gene42339 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42341.t1 Aspi01Gene42341 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53341.t1 Aspi01Gene53341 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58664.t1 Aspi01Gene58664 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G122100.1 Ceric.01G122100 not classified & original description: pacid=50592616... 0.03 OrthoFinder output from all 47 species
Ceric.02G092000.1 Ceric.02G092000 not classified & original description: pacid=50583789... 0.02 OrthoFinder output from all 47 species
Ceric.14G081200.1 Ceric.14G081200 not classified & original description: pacid=50633525... 0.06 OrthoFinder output from all 47 species
Ceric.19G004900.1 Ceric.19G004900 not classified & original description: pacid=50575637... 0.04 OrthoFinder output from all 47 species
Dcu_g01335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_34249 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g19090.1 LOC_Os03g19090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g12036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_13470g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_31993g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_64016g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_80261g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8431674g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g00990.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g08990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024598 No alias not classified & original description: CDS=1-1863 0.03 OrthoFinder output from all 47 species
Smo406011 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g108440.2.1 Solyc01g108440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g112700.1.1 Solyc03g112700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33678 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g42381 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021027_P001 Zm00001e021027 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 171 271
IPR012442 DUF1645_plant 269 319
No external refs found!