GSVIVT01008642001

Description : Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana

Gene families : OG0000894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008642001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00106660	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	OrthoFinder output from all 47 species
AT5G13980	No alias	Glycosyl hydrolase family 38 protein	0.05	OrthoFinder output from all 47 species
Adi_g057346	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12592.t1	Aspi01Gene12592	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12435	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21570	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_01270	No alias	Alpha-mannosidase OS=Canavalia ensiformis...	0.05	OrthoFinder output from all 47 species
Gb_02112	No alias	Probable alpha-mannosidase At5g66150 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Len_g08754	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g32035	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37482	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g10398	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004559	alpha-mannosidase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006013	mannose metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015923	mannosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011682	Glyco_hydro_38_C	600	817
IPR000602	Glyco_hydro_38_N	40	352
IPR015341	Glyco_hydro_38_cen	357	447

External Links

No external refs found!