GSVIVT01001819001

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor

Gene families : OG0005206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005206_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01001819001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00233440	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
Dcu_g11782	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g09482	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g39040.1	LOC_Os02g39040	transcription factor (mTERF)	0.09	OrthoFinder output from all 47 species
MA_371670g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Mp1g02020.1	No alias	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
Mp3g00110.1	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Ore_g18674	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g093940.3.1	Solyc02g093940	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	280	448
IPR003690	MTERF	176	291

External Links

No external refs found!