GSVIVT01001595001 (ATPD)

Aliases : ATPD

Description : Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit delta

Gene families : OG0001923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001923_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01001595001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00232380	ATPD,...	Photosynthesis.photophosphorylation.ATP synthase...	0.16	OrthoFinder output from all 47 species
AT4G09650	ATPD	ATP synthase delta-subunit gene	0.21	OrthoFinder output from all 47 species
Adi_g040500	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Adi_g040501	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Aev_g05188	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.09	OrthoFinder output from all 47 species
Ala_g16354	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.13	OrthoFinder output from all 47 species
Aob_g04089	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Aob_g05620	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Aop_g01177	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.13	OrthoFinder output from all 47 species
Aop_g27621	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Aspi01Gene30200.t1	ATPD, Aspi01Gene30200	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Aspi01Gene41011.t1	ATPD, Aspi01Gene41011	subunit delta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Azfi_s0073.g037144	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Cba_g12515	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Ceric.15G029000.1	ATPD, Ceric.15G029000	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ceric.27G011900.1	ATPD, Ceric.27G011900	subunit delta of peripheral CF1 subcomplex of ATP...	0.18	OrthoFinder output from all 47 species
Ceric.36G009700.1	ATPD, Ceric.36G009700	subunit delta of peripheral CF1 subcomplex of ATP...	0.22	OrthoFinder output from all 47 species
Cre11.g467569	ATPD	Photosynthesis.photophosphorylation.ATP synthase...	0.02	OrthoFinder output from all 47 species
Dac_g03133	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.14	OrthoFinder output from all 47 species
Dac_g05575	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.09	OrthoFinder output from all 47 species
Dcu_g00798	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Dde_g04263	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.15	OrthoFinder output from all 47 species
Ehy_g08260	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Gb_38201	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
LOC_Os02g51470.3	ATPD, LOC_Os02g51470	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
LOC_Os03g52660.1	LOC_Os03g52660	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Len_g02669	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.18	OrthoFinder output from all 47 species
MA_10744g0010	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
MA_657g0010	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Mp3g05790.1	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.2	OrthoFinder output from all 47 species
Mp6g06680.1	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Msp_g05321	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Nbi_g12483	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ore_g18978	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Ore_g27681	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Pir_g00419	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Pnu_g09377	No alias	subunit delta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Pnu_g09378	No alias	subunit delta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Pp3c23_6060V3.1	ATPD, Pp3c23_6060	ATP synthase delta-subunit gene	0.04	OrthoFinder output from all 47 species
Ppi_g02890	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022065	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Smo128732	No alias	Photosynthesis.photophosphorylation.ATP synthase...	0.04	OrthoFinder output from all 47 species
Solyc05g050500.1.1	Solyc05g050500	ATP synthase delta chain, chloroplastic OS=Spinacia...	0.16	OrthoFinder output from all 47 species
Solyc12g056830.1.1	ATPD, Solyc12g056830	subunit delta of peripheral CF1 subcomplex of ATP...	0.17	OrthoFinder output from all 47 species
Spa_g07561	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Spa_g07562	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.15	OrthoFinder output from all 47 species
Spa_g07563	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Tin_g03812	ATPD	subunit delta of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Zm00001e023884_P001	ATPD, Zm00001e023884	subunit delta of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000711	ATPase_OSCP/dsu	63	159

External Links

No external refs found!

GSVIVT01001595001 (ATPD)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation