Solyc12g070270.2.1 (ATTAP1, TAP1, Solyc12g070270)

Aliases : ATTAP1, TAP1, Solyc12g070270

Description : subfamily ABCB transporter

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g070270.2.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g09025	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.08	OrthoFinder output from all 47 species
Cba_g02669	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G060800.1	ATTAP1, TAP1,...	subfamily ABCB transporter & original description:...	0.07	OrthoFinder output from all 47 species
Dde_g08509	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008121001	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_35052	ATTAP1, TAP1	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g68330.1	ATTAP1, TAP1,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Lfl_g13945	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp1g18530.1	ATTAP1, TAP1	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Pir_g12590	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g28543	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g03501	ATTAP1, TAP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e018873_P003	ATTAP1, TAP1,...	subfamily ABCB transporter	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	130	395

External Links

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Solyc12g070270.2.1 (ATTAP1, TAP1, Solyc12g070270)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation