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Aliases : Solyc12g038490
Description : no hits & (original description: none)
Gene families : OG0002278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002278_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G07940 | No alias | BEST Arabidopsis thaliana protein match is: dentin... | 0.1 | OrthoFinder output from all 47 species | |
| AT5G07970 | No alias | dentin sialophosphoprotein-related | 0.03 | OrthoFinder output from all 47 species | |
| AT5G07980 | No alias | dentin sialophosphoprotein-related | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g13963 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g03942 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g12552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g15227 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g38155 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g15271 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08137 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene13983.t1 | Aspi01Gene13983 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0548.g076435 | No alias | not classified & original description: CDS=704-5134 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G057900.1 | Ceric.11G057900 | not classified & original description: pacid=50596040... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G035700.1 | Ceric.13G035700 | not classified & original description: pacid=50636791... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G031800.1 | Ceric.21G031800 | not classified & original description: pacid=50604345... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g01063 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g46707 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11057 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04054 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09269 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01007885001 | No alias | No description available | 0.14 | OrthoFinder output from all 47 species | |
| GSVIVT01032923001 | No alias | No description available | 0.13 | OrthoFinder output from all 47 species | |
| Gb_16170 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36190 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g11460.1 | LOC_Os03g11460 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os03g54970.1 | LOC_Os03g54970 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g16640.1 | LOC_Os10g16640 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g19162 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g58594 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06766 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| MA_10437109g0010 | No alias | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Mp3g09130.1 | No alias | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g25739 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g12641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22933 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g43537 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g64505 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08473 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003984 | No alias | not classified & original description: CDS=1-4320 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g36193 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49527 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo406046 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g57100 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g13738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000836_P001 | Zm00001e000836 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e038728_P005 | Zm00001e038728 | no hits & (original description: none) | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0106413 | dihydrouridine synthase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |